rs10842524 chr12:25292974 T>C
- Sequence
ttgttgcttgatgtggtttggctg[T/C]gttcccacccaaatctcagtttga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- SMAD1_HUMAN IKZF1_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMAD1_HUMAN | -2.84 | 3.15 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | -0.16 | 1.11 | 1.25 | n/a | No Hit | |||
| IKZF2_HUMAN | -0.85 | 1.42 | 1.00 | n/a | n/a |
Items per page:
1 – 3 of 3