rs10864368 chr1:8858254 T>C
- Sequence
ttagtcacagttggctttccttat[T/C]tggggcctctgtgtctccagggtc
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma) primary endothelial colony-forming cells DU-528 (childhood T acute lymphoblastic leukemia)
- ASB for transcription factors
- COT1_HUMAN EMSY_HUMAN KDM1A_HUMAN NFIC_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | n/a | 4.38 | 1.50 | n/a | No Hit | |||
| EMSY_HUMAN | n/a | 4.01 | 1.00 | n/a | n/a | |||
| KDM1A_HUMAN | n/a | 4.26 | 1.17 | n/a | n/a | |||
| NFIC_HUMAN | -3.76 | 4.14 | 1.00 | n/a | No Hit | |||
| NCOR1_HUMAN | -4.12 | 3.74 | 1.67 | n/a | n/a |
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Motif analysis
