rs10873025 chr14:22556864 A>G
- Sequence
caggccagtgtctcctgggaggga[A/G]ggaggtggggaggccgtatttgcc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM19240 (B cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAG1_HUMAN REQU_HUMAN IKZF1_HUMAN ZN143_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 0.97 | 0.04 | 1.00 | n/a | n/a | |||
| REQU_HUMAN | 1.88 | -1.62 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 1.14 | -0.57 | 1.25 | n/a | No Hit | |||
| ZN143_HUMAN | 2.25 | -1.83 | 1.00 | n/a | No Hit |
Items per page:
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL Adrenal_Gland, Brain_Nucleus_accumbens_basal_ganglia, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Testis, Whole_Blood