rs10877887 chr12:62603400 T>C
- Sequence
cgggcagtggagggagcggctctc[T/C]ccgcaggacaccgccgcttttctc
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) GM12878 (female B-cells lymphoblastoid cell line) CD34+ hematopoietic stem cells
- ASB for transcription factors
- PCF11_HUMAN IKZF2_HUMAN ZNF24_HUMAN CBX5_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PCF11_HUMAN | 2.22 | n/a | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | -0.93 | 1.55 | 1.00 | n/a | n/a | |||
| ZNF24_HUMAN | 0.61 | 1.77 | 1.83 | n/a | n/a | |||
| CBX5_HUMAN | -2.34 | 2.29 | 1.00 | n/a | n/a |
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