rs10884569 chr10:107913348 G>A

Sequence
cttgcaattgcattacaaactaag[G/A]tatggtgactgatactgagctgga
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN SMCA5_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 2.11 -2.49 9.0·10-31.00 1.00 n/a n/a
SMCA5_HUMAN 2.62 -2.34 0.021.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI adolescent idiopathic scoliosis
GRASP cystatin c in serum

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