rs10886504 chr10:119496600 C>A
- Sequence
gaccctggtgcttcccccacgtgg[C/A]cctgcatgactatcgcatgccacc
- ASB in cell types
- GM19238 (female B-cells lymphoblastoid cell lines) CAR-T cells 2588 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN IRF4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.86 | 0.55 | 1.22 | -1.69 | Weak Concordant | |||
| IRF4_HUMAN | 2.31 | -0.38 | 1.00 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
