rs10888557 chr1:153352574 G>C

Sequence
agagagcaaaaagattaaaaacct[G/C]gggccaaaggaatcccacaggctg
ASB in cell types
hASC (derived adipocytes) A549 (lung carcinoma) THP-1 (acute monocytic leukemia) keratinocytes
ASB for transcription factors
RAD21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN 0.93 0.55 8.4·10-31.00 1.92 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP birth weight
GTEx eQTL Esophagus_Mucosa Lung Minor_Salivary_Gland Prostate Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Small_Intestine_Terminal_Ileum Vagina

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