rs10908763 chr1:160157445 C>T
- Sequence
taagtgagaacataaggtatttga[C/T]tttctgttcctgttagtttgctta
- ASB in cell types
- LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma) A1-2 (breast cancer cells) T47D (invasive ductal carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN PRGR_HUMAN A2NVP9_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.86 | -0.08 | 2.59 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.79 | 0.03 | 1.70 | n/a | No Hit | |||
| PRGR_HUMAN | 2.34 | -0.20 | 1.50 | -2.71 | Concordant | |||
| A2NVP9_HUMAN | 2.66 | -3.60 | 1.50 | n/a | n/a | |||
| GCR_HUMAN | 1.98 | -0.67 | 1.75 | -4.61 | Concordant |
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Motif analysis
