rs10912854 chr1:174929578 G>C

Sequence
caacataacgagatcctatctcca[G/C]aagcaaattttaaaaatcagccag
ASB for transcription factors
ZNF34_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZNF34_HUMAN 1.92 -1.61 0.041.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol,  obesity with early age of onset (age >2),  total cholesterol,  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Brain_Cortex,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Liver,  Muscle_Skeletal,  Pancreas,  Prostate,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Small_Intestine_Terminal_Ileum,  Testis,  Thyroid,  Whole_Blood

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