ADASTRA v5.1.3
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rs10914420
chr1:31511749
G
>
A
Sequence
aaacactcagaatataagaagcac[G/A]gattatgggtacgatacttagggg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
HepG2 (hepatoblastoma)
K562 (myelogenous leukemia)
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0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line)
0.23
1.13
1.00
1.0·10
-2
1.00
HepG2 (hepatoblastoma)
0.99
0.06
0.02
0.95
1.03
K562 (myelogenous leukemia)
0.97
0.49
0.04
1.00
1.02
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
bipolar disorder
,
ldl cholesterol
,
major depressive disorder
,
partial epilepsy
,
total cholesterol
GTEx eQTL
Cells_Cultured_fibroblasts
,
Colon_Transverse
,
Muscle_Skeletal
,
Nerve_Tibial
,
Testis
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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