rs10921837 chr1:195345369 T>C
- Sequence
cctaccaggctcaactgatcttcc[T/C]acctctccctcctgagtagctgag
- ASB in cell types
- GM18486 (Lymphoblastoid Cell Lines) GM19238 (female B-cells lymphoblastoid cell lines) GM19193 (female B-cells Lymphoblastoid Cell Lines) liver
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.83 | 1.50 | 2.50 | n/a | n/a | |||
| CTCF_HUMAN | 1.16 | 0.87 | 1.42 | -0.11 | Weak Concordant | |||
| RAD21_HUMAN | 1.38 | -0.04 | 1.28 | n/a | n/a |
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Motif analysis
