rs10925000 chr1:247373824 G>A
- Sequence
gcgccccagtctatgttactggga[G/A]tgtgaaagcgaccagccctgcaga
- ASB in cell types
- PANC1 (pancreatic ductal adenocarcinoma) GM18505 (female B-cells Lymphoblastoid Cell Lines) GM12891 (male B- cells lymphoblastoid cell line) foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.03 | 1.56 | 1.35 | n/a | No Hit | |||
| STAG1_HUMAN | -0.02 | 1.51 | 1.21 | n/a | n/a |
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