rs10926614 chr1:242063707 A>G
- Sequence
caaccctgtgtgtactgctctgct[A/G]aagtccacagcacatgactgagat
- ASB in cell types
- LNCaP (prostate carcinoma) VCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.56 | -0.32 | 1.68 | -2.73 | Concordant | |||
| ANDR_HUMAN | 1.87 | -1.09 | 1.62 | n/a | No Hit |
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Motif analysis
