rs10928478 chr2:134119836 C>T

Sequence
ctcctagacagggttgagagtttg[C/T]cgacggcccctgagaagctggggc
ASB in cell types
CD14+ monocytes fetal bone marrow-derived mononuclear cells 22RV1 (prostate carcinoma)
ASB for transcription factors
STAT1_HUMAN ANDR_HUMAN TF65_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.28 -0.55 1.1·10-41.00 2.00 n/a No Hit
ANDR_HUMAN 2.63 -4.96 0.021.00 2.00 n/a No Hit
TF65_HUMAN 1.61 -0.55 0.031.00 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts Colon_Sigmoid Thyroid

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