rs10947995 chr6:41921485 G>A
- Sequence
cgccgggcggcctcttgggcgctg[G/A]gagtccaccgcgcaagcgcatcct
- ASB in cell types
- CD14+ monocytes erythroid progenitors HepG2 (hepatoblastoma) breast tumor
- ASB for transcription factors
- STAT1_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.17 | 0.98 | 2.33 | n/a | No Hit | |||
| ESR1_HUMAN | 2.15 | 0.52 | 1.20 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg