rs10953811 chr7:116172451 G>C

Sequence
aggttactgaaggaacagaacaga[G/C]cttgtaaactgcaagctacatagt
ASB in cell types
LHSAR (prostate epithelial cells)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN -0.27 2.23 1.001.6·10-5 1.70 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  hdl cholesterol change with statins,  ldl cholesterol
GTEx eQTL Adipose_Subcutaneous,  Adrenal_Gland,  Artery_Aorta,  Artery_Coronary,  Artery_Tibial,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Colon_Transverse,  Heart_Left_Ventricle,  Lung,  Nerve_Tibial,  Pancreas,  Pituitary,  Testis,  Thyroid,  Whole_Blood

Download