rs1099237 chr4:120719217 C>G
- Sequence
cccagttgtgacaacccaaaatat[C/G]tcccgacattgccaaacgtcccct
- ASB in cell types
- THP-1 (acute monocytic leukemia) GBM39 (Human brain tumor) MS-1 (Small cell lung carcinoma) MOLM-13(acute monocytic leukemia(AML), Homo sapiens)
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 0.95 | 0.14 | 1.19 | n/a | n/a | |||
| CTCF_HUMAN | 1.01 | 0.73 | 1.28 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Nerve_Tibial, Pancreas