rs10995311 chr10:62805174 C>G
- Sequence
tccgatcgcgacgcggcttctggc[C/G]cggaggcgccgatgcagccgggct
- ASB in cell types
- HepG2 (hepatoblastoma) primary B-CLL cells BJ1-hTERT (Human fibroblast telomerase immortalized cell line)
- ASB for transcription factors
- TYY1_HUMAN BRD4_HUMAN EGR1_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | -0.52 | 4.08 | 1.17 | n/a | No Hit | |||
| BRD4_HUMAN | 0.53 | 3.07 | 2.00 | n/a | n/a | |||
| EGR1_HUMAN | 2.47 | n/a | 1.00 | n/a | No Hit | |||
| STAG1_HUMAN | 1.28 | -0.08 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
EMBL-EBI diastolic blood pressure, lung function (fev1/fvc), systolic blood pressure, urinary albumin excretion
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Nucleus_accumbens_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Nerve_Tibial, Small_Intestine_Terminal_Ileum, Testis, Thyroid, Whole_Blood