rs11001729 chr10:52352135 A>G

Sequence
cttctctaatctgtctgttatgag[A/G]acctaggcatgttatttttatctt
ASB for transcription factors
ATF2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ATF2_HUMAN 2.62 -2.34 5.3·10-31.00 1.00 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  college completion,  years of education
GTEx eQTL Cells_Cultured_fibroblasts

Download