rs11011632 chr10:38529225 T>A
- Sequence
tggactcgaatgtaatggaatgga[T/A]tggaatggactagaaaggaattga
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma) GM12878 (female B-cells lymphoblastoid cell line) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN EP300_HUMAN ZFX_HUMAN MCM7_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.01 | 1.67 | 2.57 | n/a | No Hit | |||
| EP300_HUMAN | 0.32 | 1.89 | 3.15 | n/a | n/a | |||
| ZFX_HUMAN | -4.87 | 2.12 | 3.00 | n/a | No Hit | |||
| MCM7_HUMAN | -1.66 | 3.14 | 2.50 | n/a | n/a | |||
| MCM3_HUMAN | n/a | 3.65 | 3.00 | n/a | n/a |
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