rs11021617 chr11:96487509 G>A
- Sequence
tgagtaggcagttttaccgtcaca[G/A]tgtaaacaaagcctccgggaagtt
- ASB in cell types
- T47D (invasive ductal carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.30 | -0.20 | 1.57 | 1.68 | Weak Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Esophagus_Mucosa, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid