rs11025544 chr11:20387462 C>G
- Sequence
ttaaccgtcatcagcgcgcctctt[C/G]agcgcgcactgcgccaaccctgcg
- ASB in cell types
- HEK293 (embryonic kidney) neutrophils from periferal blood CD14+ monocytes
- ASB for transcription factors
- ZN362_HUMAN STAT1_HUMAN RAD21_HUMAN ZFHX2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN362_HUMAN | -2.63 | 3.01 | 1.00 | n/a | n/a | |||
| STAT1_HUMAN | 0.09 | 1.58 | 1.67 | n/a | No Hit | |||
| RAD21_HUMAN | 2.13 | 0.87 | 1.15 | n/a | n/a | |||
| ZFHX2_HUMAN | 1.95 | -1.65 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Uterus, Whole_Blood