ADASTRA v5.1.3
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rs11037711
chr11:43890587
T
>
C
Sequence
tttcataaaaactatcatagtggc[T/C]gggcgtggtggcttacgcctgtaa
ASB in cell types
GM02610 (Lymphoblastoid Cell Lines)
GM10847 (female B-cells Lymphoblastoid Cell Lines)
GM18526 (B – cells Lymphoblastoid Cell Lines)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM02610 (Lymphoblastoid Cell Lines)
1.50
-0.35
1.3·10
-4
1.00
1.00
GM10847 (female B-cells Lymphoblastoid Cell Lines)
-0.44
1.86
1.00
2.7·10
-3
1.00
GM18526 (B – cells Lymphoblastoid Cell Lines)
-0.96
1.05
1.00
0.02
1.00
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL
Brain_Anterior_cingulate_cortex_BA24
,
Brain_Caudate_basal_ganglia
,
Brain_Cerebellum
,
Brain_Cortex
,
Brain_Frontal_Cortex_BA9
,
Brain_Hippocampus
,
Brain_Hypothalamus
,
Brain_Putamen_basal_ganglia
,
Cells_Cultured_fibroblasts
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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