rs11052135 chr12:32657787 G>A

Sequence
tctaagggtttcaaactatgataa[G/A]tgactaaccacattctgtgctctg
ASB in cell types
foreskin keratinocyte HeLa S3 (cervical adenocarcinoma) smooth muscle cell

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte 0.79 n/a 2.2·10-41.00 2.17
HeLa S3 (cervical adenocarcinoma) 1.35 0.13 6.4·10-30.92 1.80
smooth muscle cell 2.13 -1.59 0.041.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol stabilized warfarin dose total cholesterol triglycerides urinary albumin-to-creatinine ratio
GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Cells_Cultured_fibroblasts Esophagus_Mucosa Lung Muscle_Skeletal Testis Thyroid

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