ADASTRA v5.1.3
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rs11052135
chr12:32657787
G
>
A
Sequence
tctaagggtttcaaactatgataa[G/A]tgactaaccacattctgtgctctg
ASB in cell types
foreskin keratinocyte
HeLa S3 (cervical adenocarcinoma)
smooth muscle cell
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0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte
0.79
n/a
2.2·10
-4
1.00
2.17
HeLa S3 (cervical adenocarcinoma)
1.35
0.13
6.4·10
-3
0.92
1.80
smooth muscle cell
2.13
-1.59
0.04
1.00
1.00
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol
,
stabilized warfarin dose
,
total cholesterol
,
triglycerides
,
urinary albumin-to-creatinine ratio
GTEx eQTL
Brain_Nucleus_accumbens_basal_ganglia
,
Brain_Putamen_basal_ganglia
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Lung
,
Muscle_Skeletal
,
Testis
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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