rs11056192 chr12:7859860 T>G
- Sequence
agtactttcagagaagtgagatcc[T/G]ctaacttgaaagatcaagaagggg
- ASB in cell types
- GM19240 (B cells Lymphoblastoid Cell Lines) GM19238 (female B-cells lymphoblastoid cell lines) BEAS-2B (bronchial epithelium) GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.78 | 0.13 | 1.60 | n/a | No Hit | |||
| GCR_HUMAN | 2.66 | 0.63 | 1.00 | n/a | No Hit |
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