ADASTRA v5.1.3
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rs11057915
chr12:124927924
C
>
T
Sequence
actgagctatttcggcagccgtta[C/T]gactgcgatgctcttttatcctcc
ASB in cell types
HEK293 (embryonic kidney)
HepG2 (hepatoblastoma)
breast tumor xenograft
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
TBP_HUMAN
ANDR_HUMAN
ZN524_HUMAN
ANM1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TBP_HUMAN
2.64
-4.76
4.1·10
-5
1.00
1.75
n/a
No Hit
ANDR_HUMAN
-0.10
2.19
0.87
1.8·10
-3
2.21
n/a
No Hit
ZN524_HUMAN
n/a
3.56
1.00
2.2·10
-3
2.00
n/a
n/a
ANM1_HUMAN
2.03
-0.79
0.04
0.98
2.00
n/a
n/a
Items per page:
5
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GRASP
obesity with early age of onset (age >2)
GTEx eQTL
Cells_Cultured_fibroblasts
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)