rs11058463 chr12:126033977 C>A
- Sequence
ttgtttagttatgttgaccaggaa[C/A]tgacctttgatcatccatgcgcat
- ASB in cell types
- SNU-16 (Gastric adenocarcinoma) Detroit 562 (Pharyngeal squamous cell carcinoma)
- ASB for transcription factors
- HNF4A_HUMAN TF65_HUMAN FOXA2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HNF4A_HUMAN | 2.94 | n/a | 1.50 | n/a | No Hit | |||
| TF65_HUMAN | -0.72 | 3.24 | 2.33 | 3.78 | Concordant | |||
| FOXA2_HUMAN | -2.21 | 2.59 | 1.00 | n/a | No Hit |
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Motif analysis
