rs1107005 chr2:156341419 G>A

Sequence
acttagagtctatctaccaggacg[G/A]atggaagctttcacaattagacga
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ILF3_HUMAN VEZF1_HUMAN TF65_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ILF3_HUMAN 1.69 -1.24 0.041.00 1.00 n/a n/a
VEZF1_HUMAN 1.56 -0.99 0.041.00 1.00 n/a No Hit
TF65_HUMAN -1.96 2.24 1.000.04 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy)

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