rs11079554 chr17:65100582 A>T
- Sequence
tcctcctcctcctcgtccacctcc[A/T]cctcctcctccaccccctctccct
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line) CUTLL1 (T-cell lymphoblastic lymphoma 1) 2588 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- FOXK2_HUMAN SPI1_HUMAN AP2C_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | -0.26 | 2.61 | 1.83 | n/a | n/a | |||
| SPI1_HUMAN | 1.34 | -0.50 | 1.17 | 3.32 | Discordant | |||
| AP2C_HUMAN | 2.36 | -2.38 | 1.00 | n/a | No Hit | |||
| STAG1_HUMAN | -0.17 | 0.68 | 1.00 | n/a | n/a |
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Motif analysis
