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rs11079691 chr17:67366436 T>A

Sequence
cttggctagcttcgcacactcggg[T/A]aggcgctgatccaccgtggcgctg
ASB in cell types
K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) HepG2 (hepatoblastoma) HeLa (cervical adenocarcinoma)
ASB for transcription factors
TYY1_HUMAN CPSF3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TYY1_HUMAN 1.04 2.19 1.000.03 1.83 n/a No Hit
CPSF3_HUMAN 0.12 2.38 0.760.03 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP total cholesterol
GTEx eQTL Cells_Cultured_fibroblasts Liver Muscle_Skeletal

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