rs11086148 chr20:62972795 A>C

Sequence
ggggcctgatggcctgatggacgg[A/C]gggcaagaacccttccaccatccg
ASB for transcription factors
COT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
COT1_HUMAN 2.71 -2.78 3.6·10-31.00 1.00 -5.47 Concordant
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Motif analysis

COT1_HUMAN Concordant
COT1_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration advanced age-related macular degeneration (choroidal neovascularization) vs. no amd rheumatoid arthritis
GTEx eQTL Adipose_Subcutaneous Lung

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