rs1109998 chr9:89662295 A>G

Sequence
gcagccacctcctcagctaattga[A/G]aacaaaaagggacgcagttgtgaa
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
PKNX1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PKNX1_HUMAN 3.36 -3.03 4.9·10-81.00 1.00 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP birth weight height ldl cholesterol nonsyndromic cleft lip total cholesterol

Download