rs1110506 chr2:158507514 G>C
- Sequence
ctaatgtgtttcatctggcacttt[G/C]ccagttcagtcccttgcttacctt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7L-P(immortalized breast epithelial cell line) breast tumor HEK293 (embryonic kidney)
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN GATA3_HUMAN FOS_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.05 | 1.81 | 1.68 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.54 | -0.72 | 1.60 | n/a | No Hit | |||
| GATA3_HUMAN | 1.90 | -1.90 | 1.00 | n/a | No Hit | |||
| FOS_HUMAN | 2.46 | -2.49 | 1.00 | n/a | n/a |
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