rs11118979 chr1:208055883 T>G

Sequence
aatatttacttaacatgcaataac[T/G]gtcttattacgttttagcatatta
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN FOXA1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 1.96 -0.29 0.011.00 2.00 n/a No Hit
FOXA1_HUMAN 0.86 0.16 0.041.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi),  comorbid depressive syndrome and alcohol dependence,  cystatin c in serum,  fasting insulin,  homa-b,  homa-ir

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