rs11121723 chr1:11356237 G>A
- Sequence
gagacggttacatgactagttgtt[G/A]ttttatcttgctaatgaaaataca
- ASB in cell types
- iPSC (induced pluripotent stem cells) WA09 (embryonic stem cells) HUES64 (embryonic stem cells)
- ASB for transcription factors
- NANOG_HUMAN EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NANOG_HUMAN | 1.85 | -4.00 | 3.88 | -1.89 | Weak Concordant | |||
| EP300_HUMAN | 2.12 | -1.07 | 1.00 | n/a | n/a |
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Motif analysis
