rs11121780 chr1:11615253 C>T
- Sequence
tcgcaatcacgtcagggctgaggc[C/T]ggcaggggaggaatatgcagagac
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- SOX6_HUMAN MTG16_HUMAN HDAC1_HUMAN E2F1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SOX6_HUMAN | 2.67 | -2.34 | 1.00 | n/a | n/a | |||
| MTG16_HUMAN | 1.01 | -1.01 | 1.00 | n/a | n/a | |||
| HDAC1_HUMAN | 1.45 | -0.60 | 1.00 | n/a | n/a | |||
| E2F1_HUMAN | 2.25 | -1.83 | 1.00 | 0.95 | Weak Discordant |
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Motif analysis
