rs11122452 chr1:230167253 C>G
- Sequence
tcaaactcctgggctcaggtgatt[C/G]tcctgcctcagcctcccaagtagc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -0.13 | 1.29 | 1.06 | n/a | n/a | |||
| CTCF_HUMAN | 0.54 | 1.26 | 1.03 | n/a | No Hit |
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