rs11153427 chr6:113643405 A>T

Sequence
ccagataaaattgtttgagtgctc[A/T]tttgaaatccaaagcagccattcc
ASB in cell types
WA09 (embryonic stem cells)
ASB for transcription factors
GATA3_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA3_HUMAN -2.43 2.54 1.000.01 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  hdl cholesterol change with statins,  ldl cholesterol,  urinary albumin-to-creatinine ratio
GTEx eQTL Esophagus_Mucosa,  Muscle_Skeletal,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Stomach

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