rs11154537 chr6:130260408 A>G
- Sequence
ccaccagtgcatgcagcccctgtc[A/G]cgtacctcttgcttgctcagttga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- TADBP_HUMAN BHE40_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TADBP_HUMAN | 2.71 | -2.78 | 1.00 | n/a | n/a | |||
| BHE40_HUMAN | 2.13 | -3.54 | 1.33 | -4.39 | Concordant |
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Motif analysis
