rs11161446 chr1:84753659 T>C
- Sequence
tgttagggcggctcacagaaagca[T/C]ctacttgaaagggaggacatctca
- ASB in cell types
- foreskin keratinocyte GM12878 (female B-cells lymphoblastoid cell line) testis neural cell
- ASB for transcription factors
- CTCF_HUMAN MEF2B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.87 | 0.84 | 1.37 | n/a | No Hit | |||
| MEF2B_HUMAN | -1.86 | 2.31 | 1.00 | n/a | No Hit |
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