rs11170315 chr12:52873866 A>C

Sequence
cgtgtggtgttgctgactgtggac[A/C]gagaacttctgccgtcaagaccgt
ASB in cell types
K562 (myelogenous leukemia) BEAS-2B (bronchial epithelium)
ASB for transcription factors
GCR_HUMAN NFIC_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN 0.96 0.61 0.040.92 1.00 n/a No Hit
NFIC_HUMAN -1.61 2.66 1.000.05 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Mucosa Lung Muscle_Skeletal Pancreas Testis Thyroid

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