rs11170484 chr12:53221727 T>C
- Sequence
gccagcagcggcgactcccggaaa[T/C]ccccccctcccccgcgccccgccc
- ASB in cell types
- 22RV1 (prostate carcinoma) BJ1-hTERT (Human fibroblast telomerase immortalized cell line) breast tumor
- ASB for transcription factors
- ANDR_HUMAN EGR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.73 | 0.11 | 2.10 | n/a | No Hit | |||
| EGR1_HUMAN | -0.71 | 1.82 | 1.25 | 2.05 | Concordant |
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Motif analysis
