rs11170485 chr12:53221729 C>G
- Sequence
cagcagcggcgactcccggaaatc[C/G]ccccctcccccgcgccccgccctc
- ASB in cell types
- 22RV1 (prostate carcinoma) BJ1-hTERT (Human fibroblast telomerase immortalized cell line) breast tumor
- ASB for transcription factors
- ANDR_HUMAN EGR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.78 | 0.10 | 2.10 | n/a | No Hit | |||
| EGR1_HUMAN | -1.04 | 1.82 | 1.00 | 5.35 | Concordant |
Items per page:
1 – 2 of 2
Motif analysis
