rs111776577 chr19:16339063 C>A
- Sequence
attcctggtgtgtttccgttgaac[C/A]ccaaaccgcaaacacatcctgaca
- ASB in cell types
- MDA-MB-231 (breast adenocarcinoma) MDA-MB-231-1833 (breast cancer cells, bone-tropic metastatic line) MDA-MB-231p27CK-DD (breast cancer cells, phosphimimetic p27 cell line)
- ASB for transcription factors
- BRD4_HUMAN JUN_HUMAN MBD3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 0.06 | 1.59 | 1.88 | n/a | n/a | |||
| JUN_HUMAN | -0.82 | 1.61 | 2.38 | n/a | No Hit | |||
| MBD3_HUMAN | n/a | 2.03 | 2.00 | n/a | n/a |
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