rs111822887 chr1:110555595 G>C
- Sequence
ttgcaaccaaagggaggcccgggt[G/C]ccagtgggcggccgccgcggtgtg
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.24 | 1.09 | 1.00 | -1.51 | Weak Discordant |
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Motif analysis
