rs11182918 chr12:45215493 A>G
- Sequence
ctccctgtgtgctcgcgcgggcgg[A/G]gtagggggcgcttctccactctcc
- ASB in cell types
- K562 (myelogenous leukemia) breast tumor MOLM14 (Adult acute myeloid leukemia) HeLa S3 (cervical adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN NELFA_HUMAN VEZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.28 | 1.16 | 1.38 | -0.83 | Weak Discordant | |||
| NELFA_HUMAN | 2.06 | -1.19 | 2.00 | n/a | n/a | |||
| VEZF1_HUMAN | -0.91 | 1.96 | 2.00 | -3.79 | Discordant |
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Motif analysis
