ADASTRA v5.1.3
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rs11183699
chr12:47032750
G
>
A
Sequence
tttttagaatttcctattcaagaa[G/A]ccactagatggccctaaagcccac
ASB in cell types
THP-1 (acute monocytic leukemia)
GM10847 (female B-cells Lymphoblastoid Cell Lines)
vagina
ASB for transcription factors
RAD21_HUMAN
STAG1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN
1.86
0.59
2.5·10
-6
1.00
1.73
n/a
n/a
STAG1_HUMAN
1.34
0.09
1.5·10
-5
1.00
1.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
birth weight
,
height
GTEx eQTL
Esophagus_Mucosa
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)