rs11195182 chr10:110557179 C>T
- Sequence
cccagccacattcaaaatgagaaa[C/T]gtatacaggatgtgcaccacaagg
- ASB in cell types
- HT1080 (fibrosarcoma) Peyer's patch spleen adrenal gland
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.67 | -0.17 | 1.21 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), brain atrophy, hdl cholesterol, ldl cholesterol, total cholesterol