rs11203898 chr8:17679823 G>A

Sequence
agcctccaactgttttataatagt[G/A]ctcagtatacattacacaatcagt
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 0.22 1.46 0.850.03 1.35 n/a No Hit
FOXA1_HUMAN 0.19 1.00 1.000.05 1.38 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Caudate_basal_ganglia Brain_Cortex Brain_Hippocampus Brain_Putamen_basal_ganglia

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