ADASTRA v5.1.3
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Bill Cipher
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adastra.autosome.org
rs11206497
chr1:54971117
T
>
C
Sequence
tgccctgattgaatacctgcctga[T/C]tggtcgacttgtgtgccagtgaca
ASB in cell types
bronchial epithelial cells
ASB for transcription factors
GRHL2_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GRHL2_HUMAN
-5.30
3.24
1.00
3.7·10
-6
1.50
3.36
Concordant
Items per page:
5
1 – 1 of 1
Motif analysis
GRHL2_HUMAN
Concordant
Show reverse complement
Show rev. comp.
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Genetic associations
GRASP
abnormal involuntary movement scale
,
ldl cholesterol
,
tardive dyskinesia
GTEx eQTL
Adrenal_Gland
,
Esophagus_Mucosa
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)
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